AWARDS

平成22年 第6回日本鉱物科学会研究奨励賞 (Japanese)

PUBLICATIONS

1. Original Paper (English)
1. Suzuki Y, Kogure T, Isobe H, Sato T, Murakami T (1997) Crystal chemistry and microstructures of uranyl phosphates. Material Research Society Symposium Proceedings 506:839-846
2. Suzuki Y, Kelly SD, Kemner KM, Banfield JF (2002) Nanometer-size products of uranium bioreduction. Nature 419:134
3. Suzuki Y, Kelly SD, Kemner KM, Banfield JF (2003) Microbial populations stimulated for hexavalent uranium reduction in uranium contaminated sediment. Applied and Environmental Microbiology 69: 1337-1346
4. Takai K, Oida H, Suzuki Y, Hirayama H, Nakagawa S, Nunoura T, Inagaki F, Nealson KM, Horikoshi K (2004) Spatial distribution of marine Crenarchaeota group I in the vicinity of deep-sea hydrothermal systems. Applied and Environmental Microbiology 70:2404-2413
5. Takai K, Hirayama H, Nakagawa T, Suzuki Y, Nealson KM, Horikoshi K (2004) Thiomicrospira thermophila sp. nov., a novel microaerobic, thermotolerant, sulfur-oxidizing chemolithomixotroph isolated from a deep-sea hydrothermal fumarole in the TOTO caldera, Mariana Arc, Western Pacifics. International Journal of Systematic and Evolutionary Microbiology 54:2325-2333
6. Suzuki Y, Kelly SD, Kemner KM, F. BJ (2004) Enzymatic reduction of U(VI) by Desulfosporosinus spp. Radiochimica Acta 92:11-16
7. Suzuki Y, Inagaki F, Takai K, Nealson KM, Horikoshi K (2004) Microbial communities in inactive sulfide chimney in deep-sea hydrothermal systems. Microbial Ecology 47:186-196
8. Suzuki Y, Banfield JB (2004) Resistance to, and accumulation of, uranium by bacteria isolated from a uranium-contaminated site. Geomicrobiology Journal 21:113-121
9. Takai K, Hirayama H, Nakagawa T, Suzuki Y, Nealson KM, Horikoshi K (2005) Lebetimonas acidiphila gen. nov., sp. nov., a novel thermophilic, acidophilic, hydrogen-oxidizing chemolithoautotroph within the 'Epsilonproteobacteria', isolated from a deep-sea hydrothermal fumarole in the Mariana Arc. International Journal of Systematic and Evolutionary Microbiology 55:183-189
10. Takai K, Campbell BJ, Cary SC, Suzuki M, Oida H, Nunoura T, Hirayama H, Nakagawa S, Suzuki Y, Inagaki F, Horikoshi K (2005) Enzymatic and genetic characterization of carbon and energy metabolisms from deep-sea hydrothermal chemolithoautotrophic Epsilonproteobacteria. Applied and Environmental Microbiology 71:7310-7320
11. Nunoura T, Hirayama H, Takami H, Oida H, Nishi S, Shimamura S, Suzuki Y, Inagaki F, Takai K, Nealson KH, Horikoshi K (2005) Genetic and functional properties of uncultivated thermophilic crenarchaeotesfrom a subsurface gold mine as revealed by analysis of genome fragments. Environmental Microbiology7:1967-1984
12. Nakagawa T, Takai K, Suzuki Y, Hirayama H, Kosaka A, Tsunogai U, Gamo T, Nealson KH, Horikoshi K (2005) Geomicrobiological exploration and characterization of novel deep-sea hydrothermal activities accompanying with extremely acidic white smokers and elemental sulfur chimneys at the TOTO caldera in the Mariana Volcanic Arc. Environmental Microbiology 8:37-49
13. Hu P, Brodie EL, Suzuki Y, McAdams HH, Andersen GL (2005) Whole Genome Transcriptional Analysis of Heavy Metal Stresses in Caulobacter crescentus. Journal of Bacteriology 187:8437-8449
14. Suzuki Y, Sato T, Isobe H, Kogure T, Murakami T (2005) Dehydration processes of the meta-autunite group minerals, meta-autunite, metasaléeite and metatorbernite. American Mineralogist 90:1308-1314
15. Suzuki Y, Sasaki T, Suzuki M, Nogi Y, Miwa T, Takai K, Nealson KH, Horikoshi K (2005) Novel Chemoautotrophic Endosymbiosis Between a Member of the Epsilonproteobacteria and the Hydrothermal-Vent Gastropod Alviniconcha aff. hessleri (Gastropoda:Provannidae) from the Indian Ocean. Applied and Environmental Microbiology 71: 5440-5450
16. Suzuki Y, Sasaki T, Suzuki M, Nealson KH, Horikoshi K (2005) Molecular Phylogenetic and isotopic evidence of two lineages of chemoautotrophic endosymbionts distinct at the subdivision level harbored in one host-animal type: the genus Alviniconcha (Gastropoda: Provannidae). FEMS Micorobiology Letters 249:105-112
17. Suzuki Y, Kelly SD, Kemner KM, F. BJ (2005) Extensive, direct microbial reduction of uranium and preservation at near-surface sediment. Applied and Environmental Microbiology 71:1790-1797
18. Nakagawa S, Inagaki F, Suzuki Y, Steinsbu OS, Lever MA, Takai K, Engelen B, Saka Y, Weat CG, Horikoshi K and Integrated Ocean Drilling Program Expedition 301 Scientists (2006) Microbial community in black rust exposed to hot ridge flank crustal fluid. Applied and Environmental Microbiology, 72:6789-6799
19. Suzuki Y, Kojima S, Watanabe H, Suzuki M, Tsuchida S, Nunoura T, Hirayama H, Takai K, Nealson KH, Horikoshi K (2006) Single host and symbiont lineages of hydrothermal-vent gastropods, Ifremeria nautilei (Provannidae): Biogeography and evolution. Marine Ecology-Progress Series, 315:167-175
20. Suzuki Y, Kojima S, Sasaki T, Suzuki M, Watanabe H, Utsumi T, Urakawa H, Tsuchida S, Nunoura T, Hirayama H, Takai K, Nealson KH, Horikoshi K (2006) Host-symbiont relationships in hydrothermal gastropods of the genus Alviniconcha from the South West Pacific. Applied and Environmental Microbiology 72:1388-1393
21. Suzuki Y, Kopp RE, Kogure T, Suga A, Takai K, Tsuchida S, Ozaki N, Endo K, Hashimoto J, Kato Y, Mizota C, Hirata T, Chiba H, Nealson KH, Horikoshi K, Kirschvink JL (2006) Sclerite formation in the hydrothermal-vent "scaly-foot" gastropod - possible control on iron sulfide biomineralization by the animal. Earth and Planetary Science Letters 242: 39-50
22. Nunoura T, Oida H, Miyazaki M, Suzuki Y, Takai K, Horikoshi, K (2007) Desulfothermus okinawensis sp. nov., a thermophic and heterotrophic sulfate-reducing bacterium isolated from a deep-sea hydrothermal field. International Journal of Systematic and Evolutionary Microbiology, 57:2360-2364.
23. Nunoura T, Oida H, Miyazaki M, Suzuki Y, Takai K, Horikoshi, K (2007) Marinitoga okinawensis sp. nov., a novel thermophic and anaerobic heterotroph isolated from a deep-sea hydrothermal field, Sounthern Okinawa Trough. International Journal of Systematic and Evolutionary Microbiology, 57:467-471.
24. Nunoura T, Oida H, Miyazaki M, Suzuki Y, Takai K, Horikoshi, K (2007) Desulfothermus okinawensis sp. nov., a thermophic and heterotrophic sulfate-reducing bacterium isolated from a deep-sea hydrothermal field. International Journal of Systematic and Evolutionary Microbiology, 57:2360-2364.
25. Ito K, Suzuki Y, Suko T, Takeno N (2008) Conceptual groundwater flow modeling from non-disturbing in sedimentary rocks. Proceedings of 12th International High-Level Radioactive Waste Management Conference, 165-171.
26. Nunoura T, Miyazaki M, Suzuki Y (2008) Thermoslfidibacter takaii gen. nov., sp. nov., a thermophic sulfur-oxidizing chemoautotroph isolated from a deep-sea hydrothermal field, Sountern Okinawa Trough. International Journal of Systematic and Evolutionary Microbiology, 58:676-681.
27. Nunoura T, Miyazaki M, Suzuki Y, Takai K, Horikoshi, K (2008) Hydrogenivirga okinawensis sp. nov., a thermophic hydrogen-oxidizing, sulfur-reducing chemoautotroph isolated from a deep-sea hydrothermal field in the Southern Okinawa Trough. International Journal of Systematic and Evolutionary Microbiology, 58:659-665
28. Takai K, Nunoura T, Ishibashi J, Lupton J, Suzuki R, Hamasaki H, Ueno Y, Kawagucci S, Gamo T, Suzuki Y, Hirayama H, Horikoshi K (2008) Variability in the microbial communities and hydrothermal fluid chemistry at the newly discovered Mariner hydrothermal field, southern Lau Basin. Journal of Geophysical Research, 113:G02031
29. Suzuki Y, Suko T, Takeno N, Ito K (2008) Biogeochemical and microbiological site-characterization of deep geological environments. Proceedings of 12th International High-Level Radioactive Waste Management Conference, 179-183
30. Suzuki Y, Suko T, Yoshioka H, Takahashi M, Nanba K, Tsunogai U, Takeno N, Ito K (2009) Biogeochemical profiles in deep sedimentary rocks in an inland fore-arc basin, Central Japan. Chemical Geology, 259:107-119
31. Suzuki Y, Suzuki M, Tsuchida S, Takai K, Horikoshi K, Southward AJ, Newman WA, Yamaguchi T (2009) Molecular investigations of the stalked barnacle Vulcanolepas osheai and the epibiotic bacteria from the Brothers Caldera, Kermadec Arc, New Zealand. Journal of the Marine Biological Association of the United Kingdom, 89:727-733
32. Tsukimura K, Suzuki Y, Suzuki M, Murakami T (2010) Transformation of ferrihydrite to goethite or hematite: kinetic theory. Kinetic Theory of Crystallization of Nanoparticles. Crystal Growth & Design, 10:3596-3607
33. Reynolds K, Watanabe H, Strong E, Sasaki T, Uematsu K, Miyake H, Kojima S, Suzuki Y, Fujikura K, Kim S, Young C (2010) New Molluscan Larval Form: Brooding and Development in a Hydrothermal Vent Gastropod, Ifremeria nautilei (Provannidae). Biological Bulletin, 219: 7-11 
34. Fukuda A, Hagiwara H, Ishimura T, Kouduka M, Ioka S, Amano Y, Tsunogai U, Suzuki Y, Mizuno T (2010) Geomicrobiological properties of ultra-deep granitic groundwater from the Mizunami Underground Research Laboratory (MIU), central Japan. Microbial Ecology, 60:214-225
35. Tsuchida S, Suzuki Y, Fujiwara Y, Kawato M, Uematsu K, Yamanaka T, Mizota C, Yamamoto H (2011) Ebibiotic association between filamentous bacteria and the vent-associated galatheid crab, Shinkai crosnieri (Decapoda: Anomura).Journal of the Marine Biological Association of the United Kingdom, 91: 23-32.
36. Hirayama H, Suzuki Y, Abe M, Miyazaki M, Makita H, Inagaki F, Uematsu K, Takai K (2011) Methylothermus subterraneus sp. nov., a moderately thermophilic methanotrophic bacterium from a terrestrial subsurface hot aquifer in Japan. International Journal of Systematic and Evolutionary Microbiology, 61: 2646-2653.
37. Expedition 329 Scientists (2011) South Pacific Gyre: Subseafloor life and habitability in the South Pacific GyreIODPPreliminary Report 329. doi:10.2204/iodp.pr.329.2011
38. D’Hondt S., Inagaki F., Alvarez Zarikian C.A., the Expedition 329 Scientists (2011) Proceedings of the Integrated Ocean Drilling Program 329.
39. Kouduka M., Suko T., Morono Y., Inagaki F., Ito K., Suzuki Y. (2012) A new DNA extraction method by controlled alkaline treatments from consolidated subsurface sediments. FEMS Microbiology Letter,326: 47-54 .
40. Saito, T., Suzuki Y., Mizuno, T. (2012) Size and Elemental Analyses of Nano Colloids in Deep Granitic Groundwater: Implications for Transport of Trace Elements. Colloids and Surfaces A: Physicochemical and Engineering Aspects, Available online 29 November 2012.
41. Konno, U., Kouduka, M., Komatsu, D., Ishii, K., Fukuda, A., Tsunogai, U., Ito, K., Suzuki Y. (2013) Novel microbial populations in deep granitic groundwater from Grimsel Test Site, Switzerland. Microbial Ecology, 65: 626-637.
42. Suko, T., Kouduka, M., Nanba, K., Takahashi, M., Ito, K., Suzuki, Y. (2013) Geomicrobiological properties of Tertiary sedimentary rocks from the deep terrestrial subsurface. Physics and Chemistry of the Earth, 58-60: 28-33.
43. Machida, I., Suzuki, Y., Takeuchi, M. (2013) Carbon-14 age and chemical evolution of Ca(HCO3)2-type groundwater of age less than 8000 years in a confined sandy and muddy Pleistocence aquifer, Japan. Hydrogeology Journal, 21: 1289-1235. 
44. D’Hondt S., Inagaki F., Alvarez Zarikian C.A., the Expedition 329 Scientists (2013) IODP Expedition 329: Life and Habitability Beneath the seafloor of the South Pacific Gyre. Scientific Drilling, 15: 4-10. 
45. Nakagawa, S., Shimamura, S., Takaki, Y., Suzuki,Y., Murakami, S., Watanabe, T., Fujiyoshi, S., Mino, S.,  Sawabe,T., Maeda, T., Makita, H.,  Nemoto, S., Nishimura, S., Watanabe, H., Watsuji, T., Takai, K. (2014) Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont. The ISME Journal, 8: 40-51.
46. Yanagawa, K., Kouduka, M., Nakamura, Y., Hachikubo, A., Tomaru, H., Suzuki, Y. (2014) Distinct microbial communities thriving in gas hydrate-associated sediments from the eastern Japan Sea. Journal of Asian Earth Sciences, 90: 243-249.
47. Suzuki, Y., Konno, U., Fukuda, A., Komatsu, D. D., Hirota, A., Watanabe, K., Togo, Y., Morikawa, N., Hagiwara, H., Aosai, D., Iwatsuki, T., Tsunogai, U., Nagao, S., Ito, K., Mizuno, T (2014) Biogeochemical Signals from Deep Microbial Life in Terrestrial Crust. PLOS One, id. 0113063.
48. D'Hondt, S., Inagaki, F., Zarikian, C., Abrams, K., Dubois, N., Engelhardt, T., Evans, H.,  Ferdelman, T., Gribsholt, B., Harris, R., Hoppie, B., Hyun, J.-H., Kallmeyer, J., Kim, J., Lynch, J., McKinley, C.,  Mitsunobu, S., Morono, Y., Murray, R., Pockalny, R., Sauvage, J., Shimono, T., Shiraishi, F., Smith, D., Smith-Duque, C., Spivack, A., Steinsbu, B., Suzuki, Y., Szpak, M., Toffin, L., Uramoto, G., Yamaguchi, Y., Zhang, G.-L.,  Zhang, X.-H. and Ziebis, W.  (2015) Presence of oxygen and aerobic communities from seafloor to basement in deep-sea sediment. Nature Geoscience, 8: 299-304.  
49. Ino, K., Konno, U., Kouduka, M., Hirota, A., Togo, Y., Fukuda, A., Komatsu, D., Tsunogai, U., Tanaba, A.S., Yamamoto, S., Iwatsuki, T., Mizuno, T., Ito, K., Suzuki, Y. (2016) Deep microbial life in high-quality granitic groundwater from geochemically and geographically distinct underground boreholes. Environmental Microbiology Reports, doi: 10.1111/1758-2229.12379.    

50. Suzuki, Y., Mukai, H., Ishimura, T., Yokoyama, T.D., Sakata, S., Hirata, T., Iwatsuki, T., Mizuno, T (2016) Formation and Geological Sequestration of Uranium Nanoparticles in Deep Granitic Aquifer. Scientific Reports, doi:10.1038/srep22701.

51. Hug, L., Baker, B., Anantharaman, k., Brown, C., Probst, A., Castelle,C., Butterfield, C., Hernsdorf, A., Amano, Y., Ise, K., Suzuki, Y., Dudek, N., Relman, D., Ronald Amundson, F., Thomas, B., Banfield, J. (2016) A new view of The Tree and life's diversity. Nature Microbiology, doi:10.1038/nmicrobial16048. 

52. Togo, Y.S., Takahashi, Amano Y., Matsuzaki, H., Suzuki , Y., Terada, Y., Muramatsu, Y., Ito, K., Iwatsuki T. (2016) Age and speciation of iodine in groundwater and mudstones of the Horonobe area, Hokkaido, Japan: Implications for the origin and migration of iodine during basin evolution. Geochimica et Cosmochimica Acta, 191, 165-186.

53.  Yanagawa, K., Tani, A., Hachikubo, A., Kano, A., Suzuki, Y. (2016) Biogeochemical Cycle of Methanol in Anoxic Deep-Sea Sediments. Microbes and Environments, 31:190-193.

54.  Kouduka, M. Tanabe, A.S., Yamamoto, S., Yanagawa, K., Nakamura, Y., Akiba, F., Tomaru, H., Toju, H., Suzuki, Y. (2017)  Eukaryotic diversity in late Pleistocene marine sediments around a shallow methane hydrate deposit in the Japan Sea. Geobiology, 15:715-727.

55. Hernsdorf, A.W., Amano, Y., Miyakawa, K., Ise, K., Suzuki, Y., Anantharaman, K., Probst, A., Burstein, D., Thomas, B.C., Banfield, J.F. (2017) Potential for microbial H2 and metal transformations associated with novel bacteria and archaea in deep terrestrial subsurface sediments. The ISME Journal, 11:1915-1929.

56. Ino, K., Hernsdorf,A.W., Konno, U., Kouduka, M., Yanagawa, K., Kato,S., Sunamura, M., Hirota, A., Togo, Y.S., Ito, K., Fukuda, A., Iwatsuki, T., Mizuno,T., Komatsu, D.D., Tsunogai, U., Ishimura, T., Amano, Y.,  Thomas, B.C., Banfield,J.F., Suzuki, Y. (2017)Ecological and genomic profiling of anaerobic methane-oxidizing archaea in a deep granitic environment. ISME Journal, doi: 10.1038/ismej.2017.140. 

 

 (Japanese)

57. 鈴木庸平 (2007) 地球微生物学(その1)微生物のエネルギー獲得戦略岩石と放射性核種で呼吸する微生物. 地質ニュース630:62-66
58. 鈴木庸平, 須甲武志, 伊藤一誠 (2008) 硝酸塩イオンを電子受容体とした地下微生物生態系 無菌脱酸素掘削からの知見−. 月刊バイオインダストリー 11月号: 36-43
59. 鈴木庸平 (2009) バイオミネラリゼーションの進化に必要な因子とはスケーリーフット巻貝からの考察―. 月刊地球 31:652-657
60. 鈴木庸平 ( 2010) 地球生命環境における鉱物生命相互作用に関する研究. 岩石鉱物科学 40:36-41
61. 鈴木庸平 (2017) 放射性元素による汚染浄化に応用可能な長期固定機構の発見. Isotope News 749: 12-16
62. 鈴木庸平 (2017) 急激な地球温暖化は海洋生態系に何をもたらすのか? ~化石 DNA による近過去の復元と将来予測への挑戦~ Japan Geoscience Letter 13 No.2  

 

2. Reviews and Textbooks (English & Japanese)
63. Suzuki Y, Banfield JF (1999) Geomicrobiology of uranium, Reviews in Mineralogy 38: 393-432
64. Suzuki Y, Suko T (2006) Geomicrobiological factors that control uranium mobility in the environment: Update on recent advances in the bioremediation of uranium-contaminated sites. Journal of Mineralogical and Peterological Sciences, 101:299-307
65. 伊藤一誠, 鈴木庸平 須甲武志 (2008) 地質環境ベースライン把握のための掘削手法と水理特性評価の最適化地下水技術 50 (7), 13-20

66. Machida I, Suzuki Y, Takeuchi M (2008) The 14C age of confined groundwater in a sandy-muddy Pleistocene aquifer,  Chapter 16 in Groundwater response to  changing climate (Taniguchi M, Holman I. eds.) CRC Press: Balkema, the Netherlands.

67. 鈴木庸平(2011) 我が国の陸域地下微生物生態系の解明に向けた取り組み極限環境生物学会誌第10: 77-82
68. 関陽児, 内藤一樹, 鈴木庸平 (2012) ボーリング孔での原位置地下水試料の採取法と留意点資源地質 62 (3), 235-247
69. 鈴木庸平(2012) 地殻内微生物の探索と応用. 極限環境生物の産業展開: 271-280
70. 柳川勝紀・松本良・鈴木庸平(2012) メタン循環に関わる海底下生命圏石油技術協会誌第 77: 374-383
71. 長尾誠也・新堀雄一・田中忠夫・佐々木隆之・斉藤拓巳・桐島陽・吉川英樹・飯島和毅・濱克宏・岩月輝希・高橋嘉夫・足立泰久・鈴木庸平・渡部芳夫 (2013) 放射性廃棄物の地層処分における地下水コロイド研究の現状と今後の展開. 原子力バックエンド研究: 1: 3-14
72. 鈴木庸平(2014) ウランで呼吸する. 環境と微生物の事典. 朝倉書店 (分担執筆).